type (strain) genome server (tygs) Search Results


type strain genome server  (DSMZ)
94
DSMZ type strain genome server
Type Strain Genome Server, supplied by DSMZ, used in various techniques. Bioz Stars score: 94/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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type strain genome server tygs  (DSMZ)
95
DSMZ type strain genome server tygs
Type Strain Genome Server Tygs, supplied by DSMZ, used in various techniques. Bioz Stars score: 95/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/type+(strain)+genome+server+(tygs)/Streptomyces+cahuitamycinicus/10__3390_slash_microbiolres12010004-109-5-10
Average 95 stars, based on 1 article reviews
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chromatography: basic principles, sample preparations and related methods  (Verlag GmbH)
90
Verlag GmbH chromatography: basic principles, sample preparations and related methods
Chromatography: Basic Principles, Sample Preparations And Related Methods, supplied by Verlag GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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chi-square test for trend  (CH Instruments)
90
CH Instruments chi-square test for trend
Chi Square Test For Trend, supplied by CH Instruments, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Average 90 stars, based on 1 article reviews
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chi-square test  (CH Instruments)
90
CH Instruments chi-square test
Chi Square Test, supplied by CH Instruments, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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tyg-bmi  (CH Instruments)
90
CH Instruments tyg-bmi
Tyg Bmi, supplied by CH Instruments, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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tyg related indices  (Diabetology)
86
Diabetology tyg related indices
Tyg Related Indices, supplied by Diabetology, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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microtetraspora glauca draft genome  (DSMZ)
88
DSMZ microtetraspora glauca draft genome
Screening of Sarawak Biodiversity Centre (SBC) Actinobacteria Culture Collection for rubber degraders.
Microtetraspora Glauca Draft Genome, supplied by DSMZ, used in various techniques. Bioz Stars score: 88/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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body shape index tyg absi  (Diabetology)
86
Diabetology body shape index tyg absi
Screening of Sarawak Biodiversity Centre (SBC) Actinobacteria Culture Collection for rubber degraders.
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triglyceride glucose index tyg  (Diabetology)
86
Diabetology triglyceride glucose index tyg
Screening of Sarawak Biodiversity Centre (SBC) Actinobacteria Culture Collection for rubber degraders.
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1171 tygm 9 medium  (ATCC)
95
ATCC 1171 tygm 9 medium
Screening of Sarawak Biodiversity Centre (SBC) Actinobacteria Culture Collection for rubber degraders.
1171 Tygm 9 Medium, supplied by ATCC, used in various techniques. Bioz Stars score: 95/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Image Search Results


Screening of Sarawak Biodiversity Centre (SBC) Actinobacteria Culture Collection for rubber degraders.

Journal: Polymers

Article Title: Rubber Degrading Strains: Microtetraspora and Dactylosporangium

doi: 10.3390/polym13203524

Figure Lengend Snippet: Screening of Sarawak Biodiversity Centre (SBC) Actinobacteria Culture Collection for rubber degraders.

Article Snippet: Analysis between Microtetraspora sp. AC03309 and Microtetraspora glauca draft genome (TYGS, https://tygs.dsmz.de , accessed on 25 June 2021) provided an ANI estimate of 97.33%, digital DNA-DNA hybridization (dDDH) of 77.00%, together with genome-based phylogeny predicts that they belong to the same species ( ).

Techniques:

Microtetraspora sp. AC03309 morphology: ( a ) surface colony morphology on Yeast Malt Extract (ISP2) agar; ( b ) spore-forming structures viewed using light microscope at 750× magnification on Soil Extract agar (SEA); ( c ) sporophore branching from aerial mycelia viewed using Field Emission Scanning Electron Microscope (FESEM, Quattro Thermo Fisher Scientific, Lanham, MD, USA); ( d ) sporophore with four spores viewed using Field Emission Scanning Electron Microscope (FESEM, Quattro Thermo Fisher Scientific, Lanham, MD, USA).

Journal: Polymers

Article Title: Rubber Degrading Strains: Microtetraspora and Dactylosporangium

doi: 10.3390/polym13203524

Figure Lengend Snippet: Microtetraspora sp. AC03309 morphology: ( a ) surface colony morphology on Yeast Malt Extract (ISP2) agar; ( b ) spore-forming structures viewed using light microscope at 750× magnification on Soil Extract agar (SEA); ( c ) sporophore branching from aerial mycelia viewed using Field Emission Scanning Electron Microscope (FESEM, Quattro Thermo Fisher Scientific, Lanham, MD, USA); ( d ) sporophore with four spores viewed using Field Emission Scanning Electron Microscope (FESEM, Quattro Thermo Fisher Scientific, Lanham, MD, USA).

Article Snippet: Analysis between Microtetraspora sp. AC03309 and Microtetraspora glauca draft genome (TYGS, https://tygs.dsmz.de , accessed on 25 June 2021) provided an ANI estimate of 97.33%, digital DNA-DNA hybridization (dDDH) of 77.00%, together with genome-based phylogeny predicts that they belong to the same species ( ).

Techniques: Light Microscopy, Microscopy

Cluster of Orthologous (COGs) for Microtetraspora sp. AC03309 analyzed using egg-NOG mapper v.2 . CELLULAR PROCESSES AND SIGNALING [D] Cell cycle control, cell division, chromosome partitioning, [M] Cell wall/membrane/envelope biogenesis, [N] Cell motility; [O] Post-translational modification, protein turnover, and chaperones, [T] Signal transduction mechanisms, [U] Intracellular trafficking, secretion, and vesicular transport, [V] Defense mechanisms [W] Extracellular structures, [Y] Nuclear structure, [Z] Cytoskeleton; INFORMATION STORAGE AND PROCESSING [A] RNA processing and modification, [B] Chromatin structure and dynamics, [J] Translation, ribosomal structure and biogenesis, [K] Transcription, [L] Replication, recombination and repair; METABOLISM [C] Energy production and conversion, [E] Amino acid transport and metabolism, [F] Nucleotide transport and metabolism, [G] Carbohydrate transport and metabolism, [H] Coenzyme transport and metabolism, [I] Lipid transport and metabolism, [P] Inorganic ion transport and metabolism, [Q] Secondary metabolites biosynthesis, transport, and catabolism; POORLY CHARACTERIZED [R] General function prediction only, [S] Function unknown.

Journal: Polymers

Article Title: Rubber Degrading Strains: Microtetraspora and Dactylosporangium

doi: 10.3390/polym13203524

Figure Lengend Snippet: Cluster of Orthologous (COGs) for Microtetraspora sp. AC03309 analyzed using egg-NOG mapper v.2 . CELLULAR PROCESSES AND SIGNALING [D] Cell cycle control, cell division, chromosome partitioning, [M] Cell wall/membrane/envelope biogenesis, [N] Cell motility; [O] Post-translational modification, protein turnover, and chaperones, [T] Signal transduction mechanisms, [U] Intracellular trafficking, secretion, and vesicular transport, [V] Defense mechanisms [W] Extracellular structures, [Y] Nuclear structure, [Z] Cytoskeleton; INFORMATION STORAGE AND PROCESSING [A] RNA processing and modification, [B] Chromatin structure and dynamics, [J] Translation, ribosomal structure and biogenesis, [K] Transcription, [L] Replication, recombination and repair; METABOLISM [C] Energy production and conversion, [E] Amino acid transport and metabolism, [F] Nucleotide transport and metabolism, [G] Carbohydrate transport and metabolism, [H] Coenzyme transport and metabolism, [I] Lipid transport and metabolism, [P] Inorganic ion transport and metabolism, [Q] Secondary metabolites biosynthesis, transport, and catabolism; POORLY CHARACTERIZED [R] General function prediction only, [S] Function unknown.

Article Snippet: Analysis between Microtetraspora sp. AC03309 and Microtetraspora glauca draft genome (TYGS, https://tygs.dsmz.de , accessed on 25 June 2021) provided an ANI estimate of 97.33%, digital DNA-DNA hybridization (dDDH) of 77.00%, together with genome-based phylogeny predicts that they belong to the same species ( ).

Techniques: Modification, Transduction

Microtetraspora sp. AC03309 CRISPR array detected from CRISPRFinder server.

Journal: Polymers

Article Title: Rubber Degrading Strains: Microtetraspora and Dactylosporangium

doi: 10.3390/polym13203524

Figure Lengend Snippet: Microtetraspora sp. AC03309 CRISPR array detected from CRISPRFinder server.

Article Snippet: Analysis between Microtetraspora sp. AC03309 and Microtetraspora glauca draft genome (TYGS, https://tygs.dsmz.de , accessed on 25 June 2021) provided an ANI estimate of 97.33%, digital DNA-DNA hybridization (dDDH) of 77.00%, together with genome-based phylogeny predicts that they belong to the same species ( ).

Techniques: CRISPR

Microtetraspora sp. AC03309 antibiotic resistant gene identified using CARD database.

Journal: Polymers

Article Title: Rubber Degrading Strains: Microtetraspora and Dactylosporangium

doi: 10.3390/polym13203524

Figure Lengend Snippet: Microtetraspora sp. AC03309 antibiotic resistant gene identified using CARD database.

Article Snippet: Analysis between Microtetraspora sp. AC03309 and Microtetraspora glauca draft genome (TYGS, https://tygs.dsmz.de , accessed on 25 June 2021) provided an ANI estimate of 97.33%, digital DNA-DNA hybridization (dDDH) of 77.00%, together with genome-based phylogeny predicts that they belong to the same species ( ).

Techniques:

Microtetraspora sp. AC03309 drug target gene identified using PATRIC server and DrugBank server.

Journal: Polymers

Article Title: Rubber Degrading Strains: Microtetraspora and Dactylosporangium

doi: 10.3390/polym13203524

Figure Lengend Snippet: Microtetraspora sp. AC03309 drug target gene identified using PATRIC server and DrugBank server.

Article Snippet: Analysis between Microtetraspora sp. AC03309 and Microtetraspora glauca draft genome (TYGS, https://tygs.dsmz.de , accessed on 25 June 2021) provided an ANI estimate of 97.33%, digital DNA-DNA hybridization (dDDH) of 77.00%, together with genome-based phylogeny predicts that they belong to the same species ( ).

Techniques:

Microtetraspora sp. AC03309 putative genes involved in sulfur assimilation annotated using RAST server.

Journal: Polymers

Article Title: Rubber Degrading Strains: Microtetraspora and Dactylosporangium

doi: 10.3390/polym13203524

Figure Lengend Snippet: Microtetraspora sp. AC03309 putative genes involved in sulfur assimilation annotated using RAST server.

Article Snippet: Analysis between Microtetraspora sp. AC03309 and Microtetraspora glauca draft genome (TYGS, https://tygs.dsmz.de , accessed on 25 June 2021) provided an ANI estimate of 97.33%, digital DNA-DNA hybridization (dDDH) of 77.00%, together with genome-based phylogeny predicts that they belong to the same species ( ).

Techniques: Binding Assay

Microtetraspora sp. AC03309 secondary metabolite biosynthetic gene clusters (BGCs) were predicted using AntiSMASH 6.0.

Journal: Polymers

Article Title: Rubber Degrading Strains: Microtetraspora and Dactylosporangium

doi: 10.3390/polym13203524

Figure Lengend Snippet: Microtetraspora sp. AC03309 secondary metabolite biosynthetic gene clusters (BGCs) were predicted using AntiSMASH 6.0.

Article Snippet: Analysis between Microtetraspora sp. AC03309 and Microtetraspora glauca draft genome (TYGS, https://tygs.dsmz.de , accessed on 25 June 2021) provided an ANI estimate of 97.33%, digital DNA-DNA hybridization (dDDH) of 77.00%, together with genome-based phylogeny predicts that they belong to the same species ( ).

Techniques:

Location of lcp1 and lcp2 , and adjacent genes in Microtetraspora sp. AC03309 located on chromosome (contig 3): 1, Transcriptional regulator, TETR family; 2, Long chain fatty acid CoA ligase (EC 6.2.1.3); 3, Acetyl CoA dehydrogenase, short chain specific (EC 1.3.99.2); 4; Isoquinoline 1-oxidoreductase alpha subunit ( oxiA ); 5, Isoquinoline 1-oxidoreductase beta subunit ( oxiB ); 6, latex clearing protein 1 ( lcp1 ); 7, latex clearing protein 2 ( lcp2 ); 8, hypothetical protein; 9, Transcriptional regulator, TETR family; 10, MFS transporter; 11, hypothetical protein; 12, N-acetyltransferase; 13, pirin.

Journal: Polymers

Article Title: Rubber Degrading Strains: Microtetraspora and Dactylosporangium

doi: 10.3390/polym13203524

Figure Lengend Snippet: Location of lcp1 and lcp2 , and adjacent genes in Microtetraspora sp. AC03309 located on chromosome (contig 3): 1, Transcriptional regulator, TETR family; 2, Long chain fatty acid CoA ligase (EC 6.2.1.3); 3, Acetyl CoA dehydrogenase, short chain specific (EC 1.3.99.2); 4; Isoquinoline 1-oxidoreductase alpha subunit ( oxiA ); 5, Isoquinoline 1-oxidoreductase beta subunit ( oxiB ); 6, latex clearing protein 1 ( lcp1 ); 7, latex clearing protein 2 ( lcp2 ); 8, hypothetical protein; 9, Transcriptional regulator, TETR family; 10, MFS transporter; 11, hypothetical protein; 12, N-acetyltransferase; 13, pirin.

Article Snippet: Analysis between Microtetraspora sp. AC03309 and Microtetraspora glauca draft genome (TYGS, https://tygs.dsmz.de , accessed on 25 June 2021) provided an ANI estimate of 97.33%, digital DNA-DNA hybridization (dDDH) of 77.00%, together with genome-based phylogeny predicts that they belong to the same species ( ).

Techniques:

Micrographs of ( a ) control, rubber samples without microbial cultivation (A & D: fresh latex pieces; B & E: latex glove pieces; C & F: tyre granules); ( b , c ) rubber samples used as carbon source for cultivating Microtetraspora sp. AC03309 (A,B,C) and Dactylosporangium sp. AC04546 (D,E,F), incubated for 30 days, 28 °C at 180 rpm.

Journal: Polymers

Article Title: Rubber Degrading Strains: Microtetraspora and Dactylosporangium

doi: 10.3390/polym13203524

Figure Lengend Snippet: Micrographs of ( a ) control, rubber samples without microbial cultivation (A & D: fresh latex pieces; B & E: latex glove pieces; C & F: tyre granules); ( b , c ) rubber samples used as carbon source for cultivating Microtetraspora sp. AC03309 (A,B,C) and Dactylosporangium sp. AC04546 (D,E,F), incubated for 30 days, 28 °C at 180 rpm.

Article Snippet: Analysis between Microtetraspora sp. AC03309 and Microtetraspora glauca draft genome (TYGS, https://tygs.dsmz.de , accessed on 25 June 2021) provided an ANI estimate of 97.33%, digital DNA-DNA hybridization (dDDH) of 77.00%, together with genome-based phylogeny predicts that they belong to the same species ( ).

Techniques: Incubation

ATR-FTIR profile for fresh latex pieces as carbon source in MSM broth for 30 days, 28 °C, 180 rpm ( A ) Control ( B ) Dactylosporangium sp. AC04546 ( C ) Microtetraspora sp. AC03309.

Journal: Polymers

Article Title: Rubber Degrading Strains: Microtetraspora and Dactylosporangium

doi: 10.3390/polym13203524

Figure Lengend Snippet: ATR-FTIR profile for fresh latex pieces as carbon source in MSM broth for 30 days, 28 °C, 180 rpm ( A ) Control ( B ) Dactylosporangium sp. AC04546 ( C ) Microtetraspora sp. AC03309.

Article Snippet: Analysis between Microtetraspora sp. AC03309 and Microtetraspora glauca draft genome (TYGS, https://tygs.dsmz.de , accessed on 25 June 2021) provided an ANI estimate of 97.33%, digital DNA-DNA hybridization (dDDH) of 77.00%, together with genome-based phylogeny predicts that they belong to the same species ( ).

Techniques:

ATR-FTIR profile for latex glove strips as carbon source in MSM broth for 30 days, 28 °C, 180 rpm ( A ) Control ( B ) Dactylosporangium sp. AC04546 ( C ) Microtetraspora sp. AC03309.

Journal: Polymers

Article Title: Rubber Degrading Strains: Microtetraspora and Dactylosporangium

doi: 10.3390/polym13203524

Figure Lengend Snippet: ATR-FTIR profile for latex glove strips as carbon source in MSM broth for 30 days, 28 °C, 180 rpm ( A ) Control ( B ) Dactylosporangium sp. AC04546 ( C ) Microtetraspora sp. AC03309.

Article Snippet: Analysis between Microtetraspora sp. AC03309 and Microtetraspora glauca draft genome (TYGS, https://tygs.dsmz.de , accessed on 25 June 2021) provided an ANI estimate of 97.33%, digital DNA-DNA hybridization (dDDH) of 77.00%, together with genome-based phylogeny predicts that they belong to the same species ( ).

Techniques:

ATR-FTIR profile for tyre granules as carbon source in MSM broth for 30 days, 28 °C, 180 rpm ( A ) Control ( B ) Dactylosporangium sp. AC04546 ( C ) Microtetraspora sp. AC03309.

Journal: Polymers

Article Title: Rubber Degrading Strains: Microtetraspora and Dactylosporangium

doi: 10.3390/polym13203524

Figure Lengend Snippet: ATR-FTIR profile for tyre granules as carbon source in MSM broth for 30 days, 28 °C, 180 rpm ( A ) Control ( B ) Dactylosporangium sp. AC04546 ( C ) Microtetraspora sp. AC03309.

Article Snippet: Analysis between Microtetraspora sp. AC03309 and Microtetraspora glauca draft genome (TYGS, https://tygs.dsmz.de , accessed on 25 June 2021) provided an ANI estimate of 97.33%, digital DNA-DNA hybridization (dDDH) of 77.00%, together with genome-based phylogeny predicts that they belong to the same species ( ).

Techniques: